WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F10.1b.2 Sequence Name  F57F10.1b.2
Length (nt)  2800   Chromosome Location  II: 6137834-6157165
Chromosome . Primary Identifier  II Chromosome Location . Start  6137834
Chromosome Location . End  6157165 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F10.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019018 abts-3 F57F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F10.1b F57F10.1b 2394   II: 6137924-6137990

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1b.2 6137834 6157165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52297   157   II: 6137834-6137990 Caenorhabditis elegans
Exon52308   110   II: 6151147-6151256 Caenorhabditis elegans
Exon52315   53   II: 6151614-6151666 Caenorhabditis elegans
Exon52322   89   II: 6152641-6152729 Caenorhabditis elegans
Exon52328   91   II: 6153098-6153188 Caenorhabditis elegans
Exon52334   124   II: 6153524-6153647 Caenorhabditis elegans
Exon52340   207   II: 6153789-6153995 Caenorhabditis elegans
Exon52346   211   II: 6154041-6154251 Caenorhabditis elegans
Exon52352   114   II: 6154296-6154409 Caenorhabditis elegans
Exon52358   207   II: 6154458-6154664 Caenorhabditis elegans
Exon52364   345   II: 6154935-6155279 Caenorhabditis elegans
Exon52370   169   II: 6155380-6155548 Caenorhabditis elegans
Exon52376   174   II: 6155597-6155770 Caenorhabditis elegans
Exon52382   199   II: 6155823-6156021 Caenorhabditis elegans
Exon52388   170   II: 6156569-6156738 Caenorhabditis elegans
Exon52395   380   II: 6156786-6157165 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1b.2 6137834 6157165 1

1 Sequence

Length
2800

1 Sequence Ontology Term

Identifier Name Description
transcript