WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04A2.3i Sequence Name  C04A2.3i
Length (nt)  3282   Chromosome Location  II: 6835472-6835573
Chromosome . Primary Identifier  II Chromosome Location . Start  6835472
Chromosome Location . End  6835573
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.3i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50373 EGL-27, isoform i 124.4 1093 Caenorhabditis elegans
 

Other

77 RNAi

WormBase ID
WBRNAi00065538
WBRNAi00065539
WBRNAi00083112
WBRNAi00064616
WBRNAi00090430
WBRNAi00065914
WBRNAi00089920
WBRNAi00064634
WBRNAi00105214
WBRNAi00105216
WBRNAi00105215
WBRNAi00105218
WBRNAi00064642
WBRNAi00105217
WBRNAi00105220
WBRNAi00105219
WBRNAi00105222
WBRNAi00077700
WBRNAi00105221
WBRNAi00092131
WBRNAi00105224
WBRNAi00105223
WBRNAi00105226
WBRNAi00105225
WBRNAi00077706
WBRNAi00105228
WBRNAi00064525
WBRNAi00105227
WBRNAi00092137
WBRNAi00105230

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04A2.3i 6835472 6835573 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001194 egl-27 C04A2.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04A2.3i 6835472 6835573 1
CDS:C04A2.3i 6836627 6836767 1
CDS:C04A2.3i 6837852 6837977 1
CDS:C04A2.3i 6838027 6838091 1
CDS:C04A2.3i 6840193 6840355 1
CDS:C04A2.3i 6840451 6840630 1
CDS:C04A2.3i 6840683 6840910 1
CDS:C04A2.3i 6841485 6841713 1
CDS:C04A2.3i 6842410 6842605 1
CDS:C04A2.3i 6845362 6846487 1
CDS:C04A2.3i 6846537 6847040 1
CDS:C04A2.3i 6847091 6847312 1

1 Sequence

Length
3282

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04A2.3i.1 C04A2.3i.1 3282   II: 6835472-6847312