WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B7.6a.1 Sequence Name  C44B7.6a.1
Length (nt)  1554   Chromosome Location  II: 6872827-6877057
Chromosome . Primary Identifier  II Chromosome Location . Start  6872827
Chromosome Location . End  6877057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016628 slc-36.5 C44B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B7.6a C44B7.6a 1470   II: 6872907-6873145

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.6a.1 6872827 6877057 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54831   319   II: 6872827-6873145 Caenorhabditis elegans
Exon54834   188   II: 6873275-6873462 Caenorhabditis elegans
Exon54836   130   II: 6873509-6873638 Caenorhabditis elegans
Exon54838   160   II: 6874838-6874997 Caenorhabditis elegans
Exon54840   165   II: 6875050-6875214 Caenorhabditis elegans
Exon54842   85   II: 6875295-6875379 Caenorhabditis elegans
Exon54844   93   II: 6875428-6875520 Caenorhabditis elegans
Exon54846   89   II: 6875569-6875657 Caenorhabditis elegans
Exon54848   91   II: 6875705-6875795 Caenorhabditis elegans
Exon54851   137   II: 6876619-6876755 Caenorhabditis elegans
Exon54852   97   II: 6876961-6877057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.6a.1 6872827 6877057 -1

1 Sequence

Length
1554

1 Sequence Ontology Term

Identifier Name Description
transcript