WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B7.6b.1 Sequence Name  C44B7.6b.1
Length (nt)  1506   Chromosome Location  II: 6872829-6876179
Chromosome . Primary Identifier  II Chromosome Location . Start  6872829
Chromosome Location . End  6876179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B7.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016628 slc-36.5 C44B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B7.6b C44B7.6b 1305   II: 6872907-6873145

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.6b.1 6872829 6876179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54832   317   II: 6872829-6873145 Caenorhabditis elegans
Exon54835   188   II: 6873275-6873462 Caenorhabditis elegans
Exon54837   130   II: 6873509-6873638 Caenorhabditis elegans
Exon54839   160   II: 6874838-6874997 Caenorhabditis elegans
Exon54841   165   II: 6875050-6875214 Caenorhabditis elegans
Exon54843   85   II: 6875295-6875379 Caenorhabditis elegans
Exon54845   93   II: 6875428-6875520 Caenorhabditis elegans
Exon54847   89   II: 6875569-6875657 Caenorhabditis elegans
Exon54849   91   II: 6875705-6875795 Caenorhabditis elegans
Exon54850   188   II: 6875992-6876179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B7.6b.1 6872829 6876179 -1

1 Sequence

Length
1506

1 Sequence Ontology Term

Identifier Name Description
transcript