WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C15F1.7a Sequence Name  C15F1.7a
Length (nt)  543   Chromosome Location  II: 6972876-6972973
Chromosome . Primary Identifier  II Chromosome Location . Start  6972876
Chromosome Location . End  6972973
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23550 SOD-1, isoform a 18.7 180 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00114540
WBRNAi00087933
WBRNAi00087929
WBRNAi00087932
WBRNAi00087931
WBRNAi00067606
WBRNAi00040614
WBRNAi00085919
WBRNAi00085915
WBRNAi00085924
WBRNAi00085923
WBRNAi00010792
WBRNAi00076130
WBRNAi00085938
WBRNAi00028923
WBRNAi00085929
WBRNAi00085931
WBRNAi00086034
WBRNAi00092697
WBRNAi00112316
WBRNAi00081131

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C15F1.7a 6972876 6972973 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004930 sod-1 C15F1.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C15F1.7a 6972876 6972973 -1
CDS:C15F1.7a 6973018 6973171 -1
CDS:C15F1.7a 6973216 6973374 -1
CDS:C15F1.7a 6973418 6973501 -1
CDS:C15F1.7a 6973833 6973880 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C15F1.7a.1 C15F1.7a.1 720   II: 6972706-6973887