WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52E12.4 Sequence Name  C52E12.4
Length (nt)  4464   Chromosome Location  II: 7013213-7013393
Chromosome . Primary Identifier  II Chromosome Location . Start  7013213
Chromosome Location . End  7013393
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31684 LST-6 167.4 1487 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00043034
WBRNAi00043035
WBRNAi00012313
WBRNAi00012314
WBRNAi00076234

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52E12.4 7013213 7013393 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016889 lst-6 C52E12.4 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52E12.4 7013213 7013393 -1
CDS:C52E12.4 7014228 7014305 -1
CDS:C52E12.4 7014509 7014602 -1
CDS:C52E12.4 7014650 7014862 -1
CDS:C52E12.4 7014913 7015276 -1
CDS:C52E12.4 7015335 7015471 -1
CDS:C52E12.4 7015526 7015647 -1
CDS:C52E12.4 7015704 7015832 -1
CDS:C52E12.4 7016208 7016379 -1
CDS:C52E12.4 7016674 7017072 -1
CDS:C52E12.4 7017457 7017553 -1
CDS:C52E12.4 7017605 7017762 -1
CDS:C52E12.4 7017814 7018537 -1
CDS:C52E12.4 7018615 7018808 -1
CDS:C52E12.4 7018954 7019587 -1
CDS:C52E12.4 7019633 7019807 -1
CDS:C52E12.4 7020153 7020240 -1
CDS:C52E12.4 7021607 7021868 -1
CDS:C52E12.4 7021916 7022074 -1
CDS:C52E12.4 7022426 7022509 -1

1 Sequence

Length
4464

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52E12.4.1 C52E12.4.1 4897   II: 7012780-7022509