WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T02G5.9a Sequence Name  T02G5.9a
Length (nt)  1719   Chromosome Location  II: 7070391-7070917
Chromosome . Primary Identifier  II Chromosome Location . Start  7070391
Chromosome Location . End  7070917
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02G5.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04861 KARS-1, isoform a 65.1 572 Caenorhabditis elegans
 

Other

48 RNAi

WormBase ID
WBRNAi00095703
WBRNAi00096729
WBRNAi00096731
WBRNAi00096733
WBRNAi00096750
WBRNAi00096749
WBRNAi00096751
WBRNAi00096777
WBRNAi00096779
WBRNAi00096781
WBRNAi00096783
WBRNAi00096785
WBRNAi00096798
WBRNAi00096810
WBRNAi00096812
WBRNAi00096811
WBRNAi00096814
WBRNAi00096813
WBRNAi00096816
WBRNAi00096815
WBRNAi00096818
WBRNAi00096817
WBRNAi00009101
WBRNAi00094077
WBRNAi00085794
WBRNAi00035072
WBRNAi00052232
WBRNAi00093132
WBRNAi00111682
WBRNAi00097778

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T02G5.9a 7070391 7070917 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002238 kars-1 T02G5.9 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T02G5.9a 7070391 7070917 -1
CDS:T02G5.9a 7070966 7071543 -1
CDS:T02G5.9a 7071592 7072173 -1
CDS:T02G5.9a 7072358 7072389 -1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T02G5.9a.1 T02G5.9a.1 1953   II: 7070183-7072415