WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C27H5.2b Sequence Name  C27H5.2b
Length (nt)  1380   Chromosome Location  II: 7155683-7155707
Chromosome . Primary Identifier  II Chromosome Location . Start  7155683
Chromosome Location . End  7155707
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H5.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29191 C27H5.2, isoform b 52.4 459 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00082911
WBRNAi00001173
WBRNAi00041373
WBRNAi00011274

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C27H5.2b 7155683 7155707 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016172 C27H5.2 C27H5.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C27H5.2b 7155683 7155707 1
CDS:C27H5.2b 7157051 7157143 1
CDS:C27H5.2b 7157867 7157989 1
CDS:C27H5.2b 7158033 7158158 1
CDS:C27H5.2b 7158251 7158354 1
CDS:C27H5.2b 7158420 7158695 1
CDS:C27H5.2b 7158742 7158824 1
CDS:C27H5.2b 7158874 7158976 1
CDS:C27H5.2b 7159024 7159235 1
CDS:C27H5.2b 7159284 7159392 1
CDS:C27H5.2b 7159509 7159612 1
CDS:C27H5.2b 7159684 7159705 1

1 Sequence

Length
1380

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C27H5.2b.1 C27H5.2b.1 1679   II: 7155683-7160004