WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E04F6.2.1 Sequence Name  E04F6.2.1
Length (nt)  976   Chromosome Location  II: 7200549-7201882
Chromosome . Primary Identifier  II Chromosome Location . Start  7200549
Chromosome Location . End  7201882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E04F6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017122 pcrg-1 E04F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E04F6.2 E04F6.2 885   II: 7200611-7200666

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E04F6.2.1 7200549 7201882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56173   118   II: 7200549-7200666 Caenorhabditis elegans
Exon56174   136   II: 7200722-7200857 Caenorhabditis elegans
Exon56175   96   II: 7200962-7201057 Caenorhabditis elegans
Exon56176   89   II: 7201127-7201215 Caenorhabditis elegans
Exon56177   103   II: 7201258-7201360 Caenorhabditis elegans
Exon56178   232   II: 7201404-7201635 Caenorhabditis elegans
Exon56179   202   II: 7201681-7201882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E04F6.2.1 7200549 7201882 1

1 Sequence

Length
976

1 Sequence Ontology Term

Identifier Name Description
transcript