WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1022.7b.1 Sequence Name  D1022.7b.1
Length (nt)  4279   Chromosome Location  II: 7472729-7478537
Chromosome . Primary Identifier  II Chromosome Location . Start  7472729
Chromosome Location . End  7478537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1022.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000101 aka-1 D1022.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1022.7b D1022.7b 3855   II: 7473148-7473246

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1022.7b.1 7472729 7478537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57030   518   II: 7472729-7473246 Caenorhabditis elegans
Exon57033   109   II: 7473292-7473400 Caenorhabditis elegans
Exon57035   78   II: 7473451-7473528 Caenorhabditis elegans
Exon57037   149   II: 7473574-7473722 Caenorhabditis elegans
Exon57039   260   II: 7473773-7474032 Caenorhabditis elegans
Exon57041   70   II: 7474080-7474149 Caenorhabditis elegans
Exon57043   78   II: 7474198-7474275 Caenorhabditis elegans
Exon57045   191   II: 7474322-7474512 Caenorhabditis elegans
Exon57047   265   II: 7474568-7474832 Caenorhabditis elegans
Exon57049   188   II: 7475643-7475830 Caenorhabditis elegans
Exon57051   232   II: 7475882-7476113 Caenorhabditis elegans
Exon57053   478   II: 7476159-7476636 Caenorhabditis elegans
Exon57056   164   II: 7476682-7476845 Caenorhabditis elegans
Exon57060   171   II: 7476890-7477060 Caenorhabditis elegans
Exon57063   846   II: 7477110-7477955 Caenorhabditis elegans
Exon57066   270   II: 7478005-7478274 Caenorhabditis elegans
Exon57070   212   II: 7478326-7478537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1022.7b.1 7472729 7478537 -1

1 Sequence

Length
4279

1 Sequence Ontology Term

Identifier Name Description
transcript