WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D2.4.1 Sequence Name  F35D2.4.1
Length (nt)  2918   Chromosome Location  II: 7580144-7583655
Chromosome . Primary Identifier  II Chromosome Location . Start  7580144
Chromosome Location . End  7583655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018042 mks-3 F35D2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D2.4 F35D2.4 2694   II: 7580270-7580498

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D2.4.1 7580144 7583655 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57422   355   II: 7580144-7580498 Caenorhabditis elegans
Exon57423   323   II: 7580548-7580870 Caenorhabditis elegans
Exon57424   112   II: 7580921-7581032 Caenorhabditis elegans
Exon57425   175   II: 7581087-7581261 Caenorhabditis elegans
Exon57426   217   II: 7581303-7581519 Caenorhabditis elegans
Exon57427   504   II: 7581569-7582072 Caenorhabditis elegans
Exon57428   409   II: 7582120-7582528 Caenorhabditis elegans
Exon57429   215   II: 7582590-7582804 Caenorhabditis elegans
Exon57430   135   II: 7582852-7582986 Caenorhabditis elegans
Exon57431   203   II: 7583040-7583242 Caenorhabditis elegans
Exon57432   122   II: 7583306-7583427 Caenorhabditis elegans
Exon57433   148   II: 7583508-7583655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D2.4.1 7580144 7583655 -1

1 Sequence

Length
2918

1 Sequence Ontology Term

Identifier Name Description
transcript