WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:R153.1a.1 Sequence Name  R153.1a.1
Length (nt)  1939   Chromosome Location  II: 7627775-7634231
Chromosome . Primary Identifier  II Chromosome Location . Start  7627775
Chromosome Location . End  7634231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R153.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020114 pde-4 R153.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R153.1a R153.1a 1650   II: 7628064-7628240

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R153.1a.1 7627775 7634231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57632   466   II: 7627775-7628240 Caenorhabditis elegans
Exon57638   183   II: 7628352-7628534 Caenorhabditis elegans
Exon57646   123   II: 7628587-7628709 Caenorhabditis elegans
Exon57654   155   II: 7628928-7629082 Caenorhabditis elegans
Exon57662   100   II: 7629491-7629590 Caenorhabditis elegans
Exon57670   423   II: 7629642-7630064 Caenorhabditis elegans
Exon57678   141   II: 7630883-7631023 Caenorhabditis elegans
Exon57686   77   II: 7632258-7632334 Caenorhabditis elegans
Exon57694   103   II: 7632752-7632854 Caenorhabditis elegans
Exon57703   94   II: 7633705-7633798 Caenorhabditis elegans
Exon57711   74   II: 7634158-7634231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R153.1a.1 7627775 7634231 -1

1 Sequence

Length
1939

1 Sequence Ontology Term

Identifier Name Description
transcript