WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5c.2 Sequence Name  C41C4.5c.2
Length (nt)  2764   Chromosome Location  II: 8116463-8122346
Chromosome . Primary Identifier  II Chromosome Location . Start  8116463
Chromosome Location . End  8122346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5c C41C4.5c 2490   II: 8119025-8119128

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.2 8116463 8122346 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59165   33   II: 8116463-8116495 Caenorhabditis elegans
Exon59175   39   II: 8118329-8118367 Caenorhabditis elegans
Exon59176   185   II: 8118767-8118951 Caenorhabditis elegans
Exon59180   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59187   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59194   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59201   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59208   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59215   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59222   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59229   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59236   202   II: 8121773-8121974 Caenorhabditis elegans
Exon59243   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59249   94   II: 8122253-8122346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.2 8116463 8122346 1

1 Sequence

Length
2764

1 Sequence Ontology Term

Identifier Name Description
transcript