WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5h.1 Sequence Name  C41C4.5h.1
Length (nt)  3073   Chromosome Location  II: 8116486-8122909
Chromosome . Primary Identifier  II Chromosome Location . Start  8116486
Chromosome Location . End  8122909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5h C41C4.5h 2874   II: 8116486-8116636

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5h.1 8116486 8122909 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59168   151   II: 8116486-8116636 Caenorhabditis elegans
Exon59172   150   II: 8116826-8116975 Caenorhabditis elegans
Exon59183   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59190   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59197   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59204   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59211   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59218   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59225   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59232   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59239   151   II: 8121824-8121974 Caenorhabditis elegans
Exon59246   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59248   90   II: 8122253-8122342 Caenorhabditis elegans
Exon59257   320   II: 8122590-8122909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5h.1 8116486 8122909 1

1 Sequence

Length
3073

1 Sequence Ontology Term

Identifier Name Description
transcript