WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C12.7.1 Sequence Name  T05C12.7.1
Length (nt)  1868   Chromosome Location  II: 8185443-8187601
Chromosome . Primary Identifier  II Chromosome Location . Start  8185443
Chromosome Location . End  8187601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C12.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000377 cct-1 T05C12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C12.7 T05C12.7 1650   II: 8185446-8185521

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.7.1 8185443 8187601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59420   79   II: 8185443-8185521 Caenorhabditis elegans
Exon59421   424   II: 8185566-8185989 Caenorhabditis elegans
Exon59422   306   II: 8186034-8186339 Caenorhabditis elegans
Exon59423   657   II: 8186385-8187041 Caenorhabditis elegans
Exon59424   402   II: 8187200-8187601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.7.1 8185443 8187601 1

1 Sequence

Length
1868

1 Sequence Ontology Term

Identifier Name Description
transcript