WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01C8.9.1 Sequence Name  K01C8.9.1
Length (nt)  1811   Chromosome Location  II: 8281162-8283208
Chromosome . Primary Identifier  II Chromosome Location . Start  8281162
Chromosome Location . End  8283208 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01C8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003821 nst-1 K01C8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01C8.9 K01C8.9 1671   II: 8281282-8281884

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.9.1 8281162 8283208 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59750   723   II: 8281162-8281884 Caenorhabditis elegans
Exon59751   184   II: 8281960-8282143 Caenorhabditis elegans
Exon59752   766   II: 8282192-8282957 Caenorhabditis elegans
Exon59753   99   II: 8283022-8283120 Caenorhabditis elegans
Exon59754   39   II: 8283170-8283208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.9.1 8281162 8283208 -1

1 Sequence

Length
1811

1 Sequence Ontology Term

Identifier Name Description
transcript