WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1a.6 Sequence Name  F14F11.1a.6
Length (nt)  2084   Chromosome Location  II: 8307841-8315108
Chromosome . Primary Identifier  II Chromosome Location . Start  8307841
Chromosome Location . End  8315108 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1a.6

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1a F14F11.1a 1482   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.6 8307841 8315108 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59773   335   II: 8307841-8308175 Caenorhabditis elegans
Exon59792   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59806   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59820   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59834   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59848   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59862   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59876   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59891   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59906   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59921   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59935   423   II: 8314686-8315108 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.6 8307841 8315108 -1

1 Sequence

Length
2084

1 Sequence Ontology Term

Identifier Name Description
transcript