WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1a.2 Sequence Name  F14F11.1a.2
Length (nt)  1923   Chromosome Location  II: 8307847-8321457
Chromosome . Primary Identifier  II Chromosome Location . Start  8307847
Chromosome Location . End  8321457 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1a F14F11.1a 1482   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.2 8307847 8321457 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59779   329   II: 8307847-8308175 Caenorhabditis elegans
Exon59788   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59802   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59816   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59830   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59844   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59858   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59872   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59887   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59902   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59917   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59942   52   II: 8319111-8319162 Caenorhabditis elegans
Exon59947   92   II: 8320206-8320297 Caenorhabditis elegans
Exon59951   124   II: 8321334-8321457 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.2 8307847 8321457 -1

1 Sequence

Length
1923

1 Sequence Ontology Term

Identifier Name Description
transcript