WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1f.1 Sequence Name  F14F11.1f.1
Length (nt)  1533   Chromosome Location  II: 8308014-8315700
Chromosome . Primary Identifier  II Chromosome Location . Start  8308014
Chromosome Location . End  8315700 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1f F14F11.1f 1533   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1f.1 8308014 8315700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59782   162   II: 8308014-8308175 Caenorhabditis elegans
Exon59799   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59813   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59827   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59841   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59855   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59869   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59883   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59898   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59913   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59927   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59936   45   II: 8315656-8315700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1f.1 8308014 8315700 -1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
transcript