WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26D10.5a.1 Sequence Name  C26D10.5a.1
Length (nt)  2343   Chromosome Location  II: 8346690-8350556
Chromosome . Primary Identifier  II Chromosome Location . Start  8346690
Chromosome Location . End  8350556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26D10.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001159 eff-1 C26D10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26D10.5a C26D10.5a 1977   II: 8346694-8346850

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26D10.5a.1 8346690 8350556 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59995   161   II: 8346690-8346850 Caenorhabditis elegans
Exon59997   188   II: 8346979-8347166 Caenorhabditis elegans
Exon60000   239   II: 8347214-8347452 Caenorhabditis elegans
Exon60004   303   II: 8347502-8347804 Caenorhabditis elegans
Exon60007   148   II: 8347853-8348000 Caenorhabditis elegans
Exon60010   139   II: 8348057-8348195 Caenorhabditis elegans
Exon60014   682   II: 8348244-8348925 Caenorhabditis elegans
Exon60017   483   II: 8350074-8350556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26D10.5a.1 8346690 8350556 1

1 Sequence

Length
2343

1 Sequence Ontology Term

Identifier Name Description
transcript