WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M195.3.1 Sequence Name  M195.3.1
Length (nt)  2384   Chromosome Location  II: 8363172-8369159
Chromosome . Primary Identifier  II Chromosome Location . Start  8363172
Chromosome Location . End  8369159 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M195.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000135 amt-3 M195.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M195.3 M195.3 2064   II: 8363416-8363614

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M195.3.1 8363172 8369159 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60071   443   II: 8363172-8363614 Caenorhabditis elegans
Exon60072   205   II: 8363776-8363980 Caenorhabditis elegans
Exon60073   138   II: 8364031-8364168 Caenorhabditis elegans
Exon60074   128   II: 8364220-8364347 Caenorhabditis elegans
Exon60075   131   II: 8364395-8364525 Caenorhabditis elegans
Exon60076   126   II: 8364579-8364704 Caenorhabditis elegans
Exon60077   194   II: 8364751-8364944 Caenorhabditis elegans
Exon60078   489   II: 8366721-8367209 Caenorhabditis elegans
Exon60079   291   II: 8367458-8367748 Caenorhabditis elegans
Exon60080   111   II: 8367796-8367906 Caenorhabditis elegans
Exon60081   128   II: 8369032-8369159 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M195.3.1 8363172 8369159 -1

1 Sequence

Length
2384

1 Sequence Ontology Term

Identifier Name Description
transcript