WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C9.9.1 Sequence Name  F54C9.9.1
Length (nt)  2349   Chromosome Location  II: 8578049-8581513
Chromosome . Primary Identifier  II Chromosome Location . Start  8578049
Chromosome Location . End  8581513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010044 F54C9.9 F54C9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C9.9 F54C9.9 2223   II: 8578056-8578139

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C9.9.1 8578049 8581513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60774   91   II: 8578049-8578139 Caenorhabditis elegans
Exon60775   52   II: 8578190-8578241 Caenorhabditis elegans
Exon60776   283   II: 8578287-8578569 Caenorhabditis elegans
Exon60777   87   II: 8579145-8579231 Caenorhabditis elegans
Exon60778   264   II: 8579276-8579539 Caenorhabditis elegans
Exon60779   115   II: 8579587-8579701 Caenorhabditis elegans
Exon60780   342   II: 8579798-8580139 Caenorhabditis elegans
Exon60781   214   II: 8580191-8580404 Caenorhabditis elegans
Exon60782   512   II: 8580460-8580971 Caenorhabditis elegans
Exon60783   162   II: 8581024-8581185 Caenorhabditis elegans
Exon60784   227   II: 8581287-8581513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C9.9.1 8578049 8581513 1

1 Sequence

Length
2349

1 Sequence Ontology Term

Identifier Name Description
transcript