WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.2.1 Sequence Name  D2085.2.1
Length (nt)  526   Chromosome Location  II: 8659135-8659800
Chromosome . Primary Identifier  II Chromosome Location . Start  8659135
Chromosome Location . End  8659800 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008427 atg-10 D2085.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.2 D2085.2 474   II: 8659146-8659232

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2085.2.1 8659135 8659800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60997   98   II: 8659135-8659232 Caenorhabditis elegans
Exon60998   130   II: 8659281-8659410 Caenorhabditis elegans
Exon60999   199   II: 8659456-8659654 Caenorhabditis elegans
Exon61000   99   II: 8659702-8659800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2085.2.1 8659135 8659800 1

1 Sequence

Length
526

1 Sequence Ontology Term

Identifier Name Description
transcript