WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C34C6.6a Sequence Name  C34C6.6a
Length (nt)  1509   Chromosome Location  II: 8704825-8704924
Chromosome . Primary Identifier  II Chromosome Location . Start  8704825
Chromosome Location . End  8704924
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C6.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03054 PRX-5, isoform a 55.5 502 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00111517
WBRNAi00066217
WBRNAi00067061
WBRNAi00067535
WBRNAi00067576
WBRNAi00067774
WBRNAi00067913
WBRNAi00067950
WBRNAi00067995
WBRNAi00068099
WBRNAi00041855
WBRNAi00105959
WBRNAi00106031
WBRNAi00029511
WBRNAi00102106
WBRNAi00111509
WBRNAi00066147
WBRNAi00024730
WBRNAi00072963
WBRNAi00007240
WBRNAi00108441
WBRNAi00102113
WBRNAi00008483
WBRNAi00102111
WBRNAi00023075
WBRNAi00023157
WBRNAi00023669
WBRNAi00023957
WBRNAi00103677
WBRNAi00066275

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C34C6.6a 8704825 8704924 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004194 prx-5 C34C6.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C34C6.6a 8704825 8704924 1
CDS:C34C6.6a 8704974 8705158 1
CDS:C34C6.6a 8705207 8705551 1
CDS:C34C6.6a 8705600 8705830 1
CDS:C34C6.6a 8705976 8706065 1
CDS:C34C6.6a 8706118 8706581 1
CDS:C34C6.6a 8706628 8706721 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C34C6.6a.1 C34C6.6a.1 1549   II: 8704824-8706760