WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F8.2.1 Sequence Name  K08F8.2.1
Length (nt)  1408   Chromosome Location  II: 8751986-8753940
Chromosome . Primary Identifier  II Chromosome Location . Start  8751986
Chromosome Location . End  8753940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F8.2 K08F8.2 1206   II: 8751986-8752116

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.2.1 8751986 8753940 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61652   131   II: 8751986-8752116 Caenorhabditis elegans
Exon61653   376   II: 8752191-8752566 Caenorhabditis elegans
Exon61654   223   II: 8752797-8753019 Caenorhabditis elegans
Exon61655   257   II: 8753102-8753358 Caenorhabditis elegans
Exon61656   99   II: 8753432-8753530 Caenorhabditis elegans
Exon61657   322   II: 8753619-8753940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.2.1 8751986 8753940 1

1 Sequence

Length
1408

1 Sequence Ontology Term

Identifier Name Description
transcript