WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51B9A.3.1 Sequence Name  Y51B9A.3.1
Length (nt)  1006   Chromosome Location  II: 9405534-9407120
Chromosome . Primary Identifier  II Chromosome Location . Start  9405534
Chromosome Location . End  9407120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51B9A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013085 mpz-6 Y51B9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51B9A.3 Y51B9A.3 897   II: 9405600-9405785

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51B9A.3.1 9405534 9407120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63623   252   II: 9405534-9405785 Caenorhabditis elegans
Exon63624   201   II: 9405858-9406058 Caenorhabditis elegans
Exon63625   135   II: 9406107-9406241 Caenorhabditis elegans
Exon63626   195   II: 9406285-9406479 Caenorhabditis elegans
Exon63627   81   II: 9406537-9406617 Caenorhabditis elegans
Exon63628   99   II: 9406878-9406976 Caenorhabditis elegans
Exon63629   43   II: 9407078-9407120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51B9A.3.1 9405534 9407120 -1

1 Sequence

Length
1006

1 Sequence Ontology Term

Identifier Name Description
transcript