WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09D1.8.1 Sequence Name  R09D1.8.1
Length (nt)  1422   Chromosome Location  II: 9460128-9461981
Chromosome . Primary Identifier  II Chromosome Location . Start  9460128
Chromosome Location . End  9461981 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09D1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011164 chil-21 R09D1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09D1.8 R09D1.8 1413   II: 9460128-9460947

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09D1.8.1 9460128 9461981 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63805   820   II: 9460128-9460947 Caenorhabditis elegans
Exon63806   286   II: 9460991-9461276 Caenorhabditis elegans
Exon63807   54   II: 9461323-9461376 Caenorhabditis elegans
Exon63808   72   II: 9461610-9461681 Caenorhabditis elegans
Exon63809   131   II: 9461744-9461874 Caenorhabditis elegans
Exon63810   59   II: 9461923-9461981 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09D1.8.1 9460128 9461981 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript