WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05C10.6b Sequence Name  C05C10.6b
Length (nt)  2583   Chromosome Location  II: 9940761-9940805
Chromosome . Primary Identifier  II Chromosome Location . Start  9940761
Chromosome Location . End  9940805
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C10.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27796 UFD-3, isoform b 93.9 860 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00001422
WBRNAi00039698
WBRNAi00010179
WBRNAi00076081
WBRNAi00028475
WBRNAi00093152
WBRNAi00061612
WBRNAi00078143
WBRNAi00094987

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05C10.6b 9940761 9940805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007333 ufd-3 C05C10.6 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05C10.6b 9940761 9940805 1
CDS:C05C10.6b 9940851 9941163 1
CDS:C05C10.6b 9941213 9941319 1
CDS:C05C10.6b 9941367 9942128 1
CDS:C05C10.6b 9942179 9942494 1
CDS:C05C10.6b 9942549 9942790 1
CDS:C05C10.6b 9942847 9943199 1
CDS:C05C10.6b 9943254 9943479 1
CDS:C05C10.6b 9943526 9943630 1
CDS:C05C10.6b 9943678 9943791 1

1 Sequence

Length
2583

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05C10.6b.1 C05C10.6b.1 2801   II: 9940758-9944006