WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H3.2.1 Sequence Name  F52H3.2.1
Length (nt)  2057   Chromosome Location  II: 10030889-10033213
Chromosome . Primary Identifier  II Chromosome Location . Start  10030889
Chromosome Location . End  10033213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009944 mtcu-2 F52H3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H3.2 F52H3.2 1917   II: 10031024-10031242

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.2.1 10030889 10033213 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65348   354   II: 10030889-10031242 Caenorhabditis elegans
Exon65349   440   II: 10031299-10031738 Caenorhabditis elegans
Exon65350   404   II: 10031802-10032205 Caenorhabditis elegans
Exon65351   384   II: 10032255-10032638 Caenorhabditis elegans
Exon65352   271   II: 10032692-10032962 Caenorhabditis elegans
Exon65353   204   II: 10033010-10033213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.2.1 10030889 10033213 -1

1 Sequence

Length
2057

1 Sequence Ontology Term

Identifier Name Description
transcript