WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H3.1.1 Sequence Name  F52H3.1.1
Length (nt)  2531   Chromosome Location  II: 10033266-10039980
Chromosome . Primary Identifier  II Chromosome Location . Start  10033266
Chromosome Location . End  10039980 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002497 let-268 F52H3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H3.1 F52H3.1 2193   II: 10033448-10033548

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.1.1 10033266 10039980 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65356   283   II: 10033266-10033548 Caenorhabditis elegans
Exon65358   184   II: 10035229-10035412 Caenorhabditis elegans
Exon65362   147   II: 10035460-10035606 Caenorhabditis elegans
Exon65366   174   II: 10035652-10035825 Caenorhabditis elegans
Exon65370   249   II: 10035870-10036118 Caenorhabditis elegans
Exon65374   139   II: 10036172-10036310 Caenorhabditis elegans
Exon65378   114   II: 10036359-10036472 Caenorhabditis elegans
Exon65382   875   II: 10036917-10037791 Caenorhabditis elegans
Exon65386   213   II: 10037908-10038120 Caenorhabditis elegans
Exon65391   153   II: 10039828-10039980 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52H3.1.1 10033266 10039980 -1

1 Sequence

Length
2531

1 Sequence Ontology Term

Identifier Name Description
transcript