WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09F3.3.1 Sequence Name  T09F3.3.1
Length (nt)  1121   Chromosome Location  II: 10394129-10395349
Chromosome . Primary Identifier  II Chromosome Location . Start  10394129
Chromosome Location . End  10395349 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09F3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001683 gpd-1 T09F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09F3.3 T09F3.3 1026   II: 10394137-10394659

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09F3.3.1 10394129 10395349 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66092   531   II: 10394129-10394659 Caenorhabditis elegans
Exon66093   433   II: 10394712-10395144 Caenorhabditis elegans
Exon66094   157   II: 10395193-10395349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09F3.3.1 10394129 10395349 1

1 Sequence

Length
1121

1 Sequence Ontology Term

Identifier Name Description
transcript