WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A1.3.1 Sequence Name  C06A1.3.1
Length (nt)  1194   Chromosome Location  II: 10572267-10574067
Chromosome . Primary Identifier  II Chromosome Location . Start  10572267
Chromosome Location . End  10574067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007354 C06A1.3 C06A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A1.3 C06A1.3 1095   II: 10572314-10572356

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A1.3.1 10572267 10574067 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66427   90   II: 10572267-10572356 Caenorhabditis elegans
Exon66428   93   II: 10572628-10572720 Caenorhabditis elegans
Exon66429   615   II: 10572767-10573381 Caenorhabditis elegans
Exon66430   206   II: 10573622-10573827 Caenorhabditis elegans
Exon66431   190   II: 10573878-10574067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A1.3.1 10572267 10574067 1

1 Sequence

Length
1194

1 Sequence Ontology Term

Identifier Name Description
transcript