WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M28.1.1 Sequence Name  M28.1.1
Length (nt)  1816   Chromosome Location  II: 10622265-10625946
Chromosome . Primary Identifier  II Chromosome Location . Start  10622265
Chromosome Location . End  10625946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M28.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010893 cutl-9 M28.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M28.1 M28.1 1689   II: 10622305-10622355

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M28.1.1 10622265 10625946 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66542   91   II: 10622265-10622355 Caenorhabditis elegans
Exon66543   58   II: 10623059-10623116 Caenorhabditis elegans
Exon66544   568   II: 10623186-10623753 Caenorhabditis elegans
Exon66545   148   II: 10623995-10624142 Caenorhabditis elegans
Exon66546   143   II: 10624406-10624548 Caenorhabditis elegans
Exon66547   391   II: 10624861-10625251 Caenorhabditis elegans
Exon66548   417   II: 10625530-10625946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M28.1.1 10622265 10625946 1

1 Sequence

Length
1816

1 Sequence Ontology Term

Identifier Name Description
transcript