WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G5.4.1 Sequence Name  C09G5.4.1
Length (nt)  1037   Chromosome Location  II: 10704916-10706019
Chromosome . Primary Identifier  II Chromosome Location . Start  10704916
Chromosome Location . End  10706019 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000616 col-39 C09G5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G5.4 C09G5.4 972   II: 10704922-10705062

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G5.4.1 10704916 10706019 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66713   147   II: 10704916-10705062 Caenorhabditis elegans
Exon66714   890   II: 10705130-10706019 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G5.4.1 10704916 10706019 1

1 Sequence

Length
1037

1 Sequence Ontology Term

Identifier Name Description
transcript