WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19E10.1b Sequence Name  T19E10.1b
Length (nt)  2799   Chromosome Location  II: 10778942-10779092
Chromosome . Primary Identifier  II Chromosome Location . Start  10778942
Chromosome Location . End  10779092
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E10.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01671 ECT-2, isoform b 106.4 932 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00107899
WBRNAi00107895
WBRNAi00107876
WBRNAi00107874
WBRNAi00064008
WBRNAi00064009
WBRNAi00064010
WBRNAi00053549
WBRNAi00064007
WBRNAi00009185
WBRNAi00085449
WBRNAi00035675
WBRNAi00071695
WBRNAi00065682
WBRNAi00065684
WBRNAi00065659
WBRNAi00117498
WBRNAi00117497
WBRNAi00071217
WBRNAi00080552
WBRNAi00053550
WBRNAi00026318
WBRNAi00065656
WBRNAi00065660
WBRNAi00065663
WBRNAi00080211
WBRNAi00107665

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19E10.1b 10778942 10779092 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002297 ect-2 T19E10.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19E10.1b 10778942 10779092 -1
CDS:T19E10.1b 10779481 10779610 -1
CDS:T19E10.1b 10779673 10779814 -1
CDS:T19E10.1b 10779909 10779984 -1
CDS:T19E10.1b 10780033 10780460 -1
CDS:T19E10.1b 10780511 10780636 -1
CDS:T19E10.1b 10780685 10780763 -1
CDS:T19E10.1b 10780819 10781324 -1
CDS:T19E10.1b 10781707 10782045 -1
CDS:T19E10.1b 10782119 10782334 -1
CDS:T19E10.1b 10782387 10782488 -1
CDS:T19E10.1b 10782601 10782654 -1
CDS:T19E10.1b 10782707 10782847 -1
CDS:T19E10.1b 10782894 10783079 -1
CDS:T19E10.1b 10783143 10783265 -1

1 Sequence

Length
2799

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19E10.1b.1 T19E10.1b.1 3380   II: 10778389-10783293