WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M106.4c.1 Sequence Name  M106.4c.1
Length (nt)  2130   Chromosome Location  II: 10864192-10866734
Chromosome . Primary Identifier  II Chromosome Location . Start  10864192
Chromosome Location . End  10866734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M106.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010912 gmps-1 M106.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M106.4c M106.4c 2130   II: 10864192-10864296

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M106.4c.1 10864192 10866734 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67270   105   II: 10864192-10864296 Caenorhabditis elegans
Exon67275   549   II: 10864348-10864896 Caenorhabditis elegans
Exon67280   590   II: 10864951-10865540 Caenorhabditis elegans
Exon67285   360   II: 10865589-10865948 Caenorhabditis elegans
Exon67290   519   II: 10866091-10866609 Caenorhabditis elegans
Exon67291   7   II: 10866728-10866734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M106.4c.1 10864192 10866734 -1

1 Sequence

Length
2130

1 Sequence Ontology Term

Identifier Name Description
transcript