WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03D7.8.1 Sequence Name  R03D7.8.1
Length (nt)  1855   Chromosome Location  II: 10953545-10956893
Chromosome . Primary Identifier  II Chromosome Location . Start  10953545
Chromosome Location . End  10956893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03D7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010992 R03D7.8 R03D7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03D7.8 R03D7.8 1791   II: 10953594-10953670

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03D7.8.1 10953545 10956893 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67458   126   II: 10953545-10953670 Caenorhabditis elegans
Exon67459   78   II: 10953720-10953797 Caenorhabditis elegans
Exon67460   78   II: 10953861-10953938 Caenorhabditis elegans
Exon67461   319   II: 10953989-10954307 Caenorhabditis elegans
Exon67462   133   II: 10954675-10954807 Caenorhabditis elegans
Exon67463   92   II: 10954854-10954945 Caenorhabditis elegans
Exon67464   156   II: 10955006-10955161 Caenorhabditis elegans
Exon67465   192   II: 10955207-10955398 Caenorhabditis elegans
Exon67466   403   II: 10955807-10956209 Caenorhabditis elegans
Exon67467   51   II: 10956527-10956577 Caenorhabditis elegans
Exon67468   103   II: 10956624-10956726 Caenorhabditis elegans
Exon67469   124   II: 10956770-10956893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03D7.8.1 10953545 10956893 -1

1 Sequence

Length
1855

1 Sequence Ontology Term

Identifier Name Description
transcript