WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33A8.1.1 Sequence Name  F33A8.1.1
Length (nt)  2805   Chromosome Location  II: 11022370-11027906
Chromosome . Primary Identifier  II Chromosome Location . Start  11022370
Chromosome Location . End  11027906 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33A8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002957 let-858 F33A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33A8.1 F33A8.1 2694   II: 11022374-11022460

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.1.1 11022370 11027906 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67816   91   II: 11022370-11022460 Caenorhabditis elegans
Exon67817   81   II: 11022507-11022587 Caenorhabditis elegans
Exon67818   125   II: 11022747-11022871 Caenorhabditis elegans
Exon67819   381   II: 11022918-11023298 Caenorhabditis elegans
Exon67820   478   II: 11023348-11023825 Caenorhabditis elegans
Exon67825   103   II: 11025843-11025945 Caenorhabditis elegans
Exon67826   208   II: 11026003-11026210 Caenorhabditis elegans
Exon67827   88   II: 11026349-11026436 Caenorhabditis elegans
Exon67828   359   II: 11026606-11026964 Caenorhabditis elegans
Exon67829   891   II: 11027016-11027906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33A8.1.1 11022370 11027906 1

1 Sequence

Length
2805

1 Sequence Ontology Term

Identifier Name Description
transcript