WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40F8.5a Sequence Name  F40F8.5a
Length (nt)  1347   Chromosome Location  II: 11133025-11133151
Chromosome . Primary Identifier  II Chromosome Location . Start  11133025
Chromosome Location . End  11133151
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F8.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46778 F40F8.5, isoform a 52.7 448 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00083275

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40F8.5a 11133025 11133151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009578 F40F8.5 F40F8.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40F8.5a 11133025 11133151 -1
CDS:F40F8.5a 11133203 11133305 -1
CDS:F40F8.5a 11133353 11133475 -1
CDS:F40F8.5a 11133525 11133656 -1
CDS:F40F8.5a 11133703 11133837 -1
CDS:F40F8.5a 11133981 11134112 -1
CDS:F40F8.5a 11134224 11134289 -1
CDS:F40F8.5a 11134337 11134594 -1
CDS:F40F8.5a 11134657 11134927 -1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40F8.5a.1 F40F8.5a.1 1521   II: 11132852-11134928