WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47G2.5b Sequence Name  C47G2.5b
Length (nt)  2154   Chromosome Location  II: 11297700-11297836
Chromosome . Primary Identifier  II Chromosome Location . Start  11297700
Chromosome Location . End  11297836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47G2.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41110 SAPS-1, isoform b 80.5 717 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00024849
WBRNAi00008533
WBRNAi00091026
WBRNAi00091185
WBRNAi00091184
WBRNAi00111999
WBRNAi00085279
WBRNAi00001658
WBRNAi00042704
WBRNAi00081690

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C47G2.5b 11297700 11297836 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008166 saps-1 C47G2.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C47G2.5b 11297700 11297836 1
CDS:C47G2.5b 11297883 11298042 1
CDS:C47G2.5b 11298096 11298215 1
CDS:C47G2.5b 11298263 11298397 1
CDS:C47G2.5b 11298451 11298666 1
CDS:C47G2.5b 11298722 11299132 1
CDS:C47G2.5b 11299201 11299497 1
CDS:C47G2.5b 11299560 11299777 1
CDS:C47G2.5b 11299825 11300036 1
CDS:C47G2.5b 11300364 11300611 1

1 Sequence

Length
2154

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47G2.5b.1 C47G2.5b.1 2815   II: 11297688-11301260