WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.8a.1 Sequence Name  B0491.8a.1
Length (nt)  3095   Chromosome Location  II: 11351899-11370316
Chromosome . Primary Identifier  II Chromosome Location . Start  11351899
Chromosome Location . End  11370316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000529 clh-2 B0491.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.8a B0491.8a 2637   II: 11351991-11352088

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8a.1 11351899 11370316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68936   190   II: 11351899-11352088 Caenorhabditis elegans
Exon68939   122   II: 11365392-11365513 Caenorhabditis elegans
Exon68942   120   II: 11365883-11366002 Caenorhabditis elegans
Exon68945   132   II: 11366052-11366183 Caenorhabditis elegans
Exon68948   134   II: 11366592-11366725 Caenorhabditis elegans
Exon68951   91   II: 11366935-11367025 Caenorhabditis elegans
Exon68954   72   II: 11367243-11367314 Caenorhabditis elegans
Exon68957   316   II: 11367359-11367674 Caenorhabditis elegans
Exon68960   244   II: 11367721-11367964 Caenorhabditis elegans
Exon68963   91   II: 11368009-11368099 Caenorhabditis elegans
Exon68966   185   II: 11368153-11368337 Caenorhabditis elegans
Exon68969   253   II: 11368386-11368638 Caenorhabditis elegans
Exon68972   148   II: 11368684-11368831 Caenorhabditis elegans
Exon68975   226   II: 11368888-11369113 Caenorhabditis elegans
Exon68978   189   II: 11369163-11369351 Caenorhabditis elegans
Exon68981   582   II: 11369735-11370316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8a.1 11351899 11370316 1

1 Sequence

Length
3095

1 Sequence Ontology Term

Identifier Name Description
transcript