WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A11.6c.1 Sequence Name  F07A11.6c.1
Length (nt)  7179   Chromosome Location  II: 11615242-11633586
Chromosome . Primary Identifier  II Chromosome Location . Start  11615242
Chromosome Location . End  11633586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008549 din-1 F07A11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A11.6c F07A11.6c 7179   II: 11615242-11615346

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6c.1 11615242 11633586 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69720   105   II: 11615242-11615346 Caenorhabditis elegans
Exon69723   105   II: 11615796-11615900 Caenorhabditis elegans
Exon69730   170   II: 11615953-11616122 Caenorhabditis elegans
Exon69738   190   II: 11616939-11617128 Caenorhabditis elegans
Exon69748   180   II: 11621132-11621311 Caenorhabditis elegans
Exon69753   1077   II: 11622548-11623624 Caenorhabditis elegans
Exon69758   108   II: 11623689-11623796 Caenorhabditis elegans
Exon69762   588   II: 11623936-11624523 Caenorhabditis elegans
Exon69767   645   II: 11624629-11625273 Caenorhabditis elegans
Exon69772   1548   II: 11625321-11626868 Caenorhabditis elegans
Exon69777   210   II: 11627018-11627227 Caenorhabditis elegans
Exon69782   478   II: 11627730-11628207 Caenorhabditis elegans
Exon69787   154   II: 11628264-11628417 Caenorhabditis elegans
Exon69792   191   II: 11628466-11628656 Caenorhabditis elegans
Exon69797   246   II: 11629169-11629414 Caenorhabditis elegans
Exon69803   215   II: 11630588-11630802 Caenorhabditis elegans
Exon69807   271   II: 11631657-11631927 Caenorhabditis elegans
Exon69811   270   II: 11632004-11632273 Caenorhabditis elegans
Exon69813   75   II: 11633017-11633091 Caenorhabditis elegans
Exon69816   78   II: 11633137-11633214 Caenorhabditis elegans
Exon69819   168   II: 11633264-11633431 Caenorhabditis elegans
Exon69821   107   II: 11633480-11633586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6c.1 11615242 11633586 -1

1 Sequence

Length
7179

1 Sequence Ontology Term

Identifier Name Description
transcript