WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.2a.1 Sequence Name  Y17G7B.2a.1
Length (nt)  2325   Chromosome Location  II: 11980463-11989050
Chromosome . Primary Identifier  II Chromosome Location . Start  11980463
Chromosome Location . End  11989050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012458 ash-2 Y17G7B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.2a Y17G7B.2a 1713   II: 11980475-11980545

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.2a.1 11980463 11989050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70702   83   II: 11980463-11980545 Caenorhabditis elegans
Exon70705   93   II: 11980628-11980720 Caenorhabditis elegans
Exon70713   325   II: 11980772-11981096 Caenorhabditis elegans
Exon70715   221   II: 11982034-11982254 Caenorhabditis elegans
Exon70722   114   II: 11983010-11983123 Caenorhabditis elegans
Exon70726   263   II: 11984657-11984919 Caenorhabditis elegans
Exon70731   113   II: 11985979-11986091 Caenorhabditis elegans
Exon70736   201   II: 11987020-11987220 Caenorhabditis elegans
Exon70741   91   II: 11987416-11987506 Caenorhabditis elegans
Exon70750   821   II: 11988230-11989050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.2a.1 11980463 11989050 1

1 Sequence

Length
2325

1 Sequence Ontology Term

Identifier Name Description
transcript