WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57G9.4.1 Sequence Name  F57G9.4.1
Length (nt)  1071   Chromosome Location  II: 12399399-12401891
Chromosome . Primary Identifier  II Chromosome Location . Start  12399399
Chromosome Location . End  12401891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57G9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010220 sre-29 F57G9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57G9.4 F57G9.4 1071   II: 12399399-12399606

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57G9.4.1 12399399 12401891 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71471   208   II: 12399399-12399606 Caenorhabditis elegans
Exon71472   125   II: 12400211-12400335 Caenorhabditis elegans
Exon71473   123   II: 12400493-12400615 Caenorhabditis elegans
Exon71474   157   II: 12400657-12400813 Caenorhabditis elegans
Exon71475   458   II: 12401434-12401891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57G9.4.1 12399399 12401891 -1

1 Sequence

Length
1071

1 Sequence Ontology Term

Identifier Name Description
transcript