WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38E10A.4 Sequence Name  Y38E10A.4
Length (nt)  1260   Chromosome Location  II: 12575709-12576493
Chromosome . Primary Identifier  II Chromosome Location . Start  12575709
Chromosome Location . End  12576493
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38641 CLEC-8 46.2 419 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056025
WBRNAi00020275

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.4 12575709 12576493 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012582 clec-8 Y38E10A.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38E10A.4 12575709 12576493 -1
CDS:Y38E10A.4 12576566 12576697 -1
CDS:Y38E10A.4 12576747 12576888 -1
CDS:Y38E10A.4 12577522 12577722 -1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38E10A.4.1 Y38E10A.4.1 1617   II: 12575691-12578061