WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46G5A.1c Sequence Name  Y46G5A.1c
Length (nt)  2334   Chromosome Location  II: 12715706-12716228
Chromosome . Primary Identifier  II Chromosome Location . Start  12715706
Chromosome Location . End  12716228
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43347 TBC-17, isoform c 87.6 777 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056667
WBRNAi00020648
WBRNAi00037125
WBRNAi00002323
WBRNAi00103595

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.1c 12715706 12716228 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012894 tbc-17 Y46G5A.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.1c 12715706 12716228 1
CDS:Y46G5A.1c 12716760 12716931 1
CDS:Y46G5A.1c 12716992 12717342 1
CDS:Y46G5A.1c 12717825 12718252 1
CDS:Y46G5A.1c 12718769 12718893 1
CDS:Y46G5A.1c 12719964 12720111 1
CDS:Y46G5A.1c 12721100 12721266 1
CDS:Y46G5A.1c 12721816 12721982 1
CDS:Y46G5A.1c 12723583 12723722 1
CDS:Y46G5A.1c 12725033 12725145 1

1 Sequence

Length
2334

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46G5A.1c.1 Y46G5A.1c.1 2790   II: 12715671-12725566