WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.15.1 Sequence Name  Y46G5A.15.1
Length (nt)  1209   Chromosome Location  II: 12782736-12785416
Chromosome . Primary Identifier  II Chromosome Location . Start  12782736
Chromosome Location . End  12785416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012906 Y46G5A.15 Y46G5A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.15 Y46G5A.15 915   II: 12783020-12783028

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.15.1 12782736 12785416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72175   293   II: 12782736-12783028 Caenorhabditis elegans
Exon72176   90   II: 12783192-12783281 Caenorhabditis elegans
Exon72177   60   II: 12783325-12783384 Caenorhabditis elegans
Exon72178   323   II: 12783441-12783763 Caenorhabditis elegans
Exon72179   87   II: 12783809-12783895 Caenorhabditis elegans
Exon72180   30   II: 12783954-12783983 Caenorhabditis elegans
Exon72181   63   II: 12784030-12784092 Caenorhabditis elegans
Exon72182   45   II: 12784279-12784323 Caenorhabditis elegans
Exon72183   66   II: 12784373-12784438 Caenorhabditis elegans
Exon72184   54   II: 12785072-12785125 Caenorhabditis elegans
Exon72185   98   II: 12785319-12785416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.15.1 12782736 12785416 -1

1 Sequence

Length
1209

1 Sequence Ontology Term

Identifier Name Description
transcript