WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G1.1.1 Sequence Name  F58G1.1.1
Length (nt)  3369   Chromosome Location  II: 12919551-12923377
Chromosome . Primary Identifier  II Chromosome Location . Start  12919551
Chromosome Location . End  12923377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010263 wago-4 F58G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G1.1 F58G1.1 2898   II: 12919577-12919732

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G1.1.1 12919551 12923377 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72439   182   II: 12919551-12919732 Caenorhabditis elegans
Exon72440   191   II: 12919785-12919975 Caenorhabditis elegans
Exon72441   169   II: 12920021-12920189 Caenorhabditis elegans
Exon72442   406   II: 12920234-12920639 Caenorhabditis elegans
Exon72443   727   II: 12920686-12921412 Caenorhabditis elegans
Exon72444   176   II: 12921458-12921633 Caenorhabditis elegans
Exon72445   169   II: 12921680-12921848 Caenorhabditis elegans
Exon72446   175   II: 12921898-12922072 Caenorhabditis elegans
Exon72447   246   II: 12922116-12922361 Caenorhabditis elegans
Exon72448   365   II: 12922402-12922766 Caenorhabditis elegans
Exon72449   563   II: 12922815-12923377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G1.1.1 12919551 12923377 1

1 Sequence

Length
3369

1 Sequence Ontology Term

Identifier Name Description
transcript