WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F1A.9.1 Sequence Name  Y38F1A.9.1
Length (nt)  374   Chromosome Location  II: 13006613-13008164
Chromosome . Primary Identifier  II Chromosome Location . Start  13006613
Chromosome Location . End  13008164 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003860 oig-2 Y38F1A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F1A.9 Y38F1A.9 327   II: 13006659-13006784

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38F1A.9.1 13006613 13008164 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72607   172   II: 13006613-13006784 Caenorhabditis elegans
Exon72608   91   II: 13007919-13008009 Caenorhabditis elegans
Exon72609   111   II: 13008054-13008164 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38F1A.9.1 13006613 13008164 -1

1 Sequence

Length
374

1 Sequence Ontology Term

Identifier Name Description
transcript