WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G4.3a.1 Sequence Name  F42G4.3a.1
Length (nt)  2139   Chromosome Location  II: 13057152-13070976
Chromosome . Primary Identifier  II Chromosome Location . Start  13057152
Chromosome Location . End  13070976 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006999 zyx-1 F42G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G4.3a F42G4.3a 1812   II: 13057152-13057196

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G4.3a.1 13057152 13070976 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72747   45   II: 13057152-13057196 Caenorhabditis elegans
Exon72750   285   II: 13059197-13059481 Caenorhabditis elegans
Exon72753   84   II: 13059557-13059640 Caenorhabditis elegans
Exon72755   341   II: 13059687-13060027 Caenorhabditis elegans
Exon72758   277   II: 13060626-13060902 Caenorhabditis elegans
Exon72761   193   II: 13064886-13065078 Caenorhabditis elegans
Exon72767   170   II: 13068740-13068909 Caenorhabditis elegans
Exon72772   179   II: 13069014-13069192 Caenorhabditis elegans
Exon72777   148   II: 13069824-13069971 Caenorhabditis elegans
Exon72785   417   II: 13070560-13070976 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G4.3a.1 13057152 13070976 1

1 Sequence

Length
2139

1 Sequence Ontology Term

Identifier Name Description
transcript